Information for 6-GCGCCTGCGC (Motif 21)

C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C
Reverse Opposite:
A T C G G T A C A C T G A G T C C G T A C A T G A T C G G T A C T C A G G A T C
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.813
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif5.17%
Number of Background Sequences with motif638.0
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets47.9 +/- 27.7bp
Average Position of motif in Background48.0 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GCGCCTGCGC-
GCGCCTGCGCA
 C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GCGCCTGCGC--
GCGCATGCGCAG
 C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--GCGCCTGCGC
GTGCGCATGCGC
 A C G T A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCTGCGC
CGCAGCTGCG-
 A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGCCTGCGC
SNGCACCTGCHS
 A C G T A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGCCTGCGC-
ACGCCCACGCA
 C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGCCTGCGC---
CTACGCCCACGCACT
 A C G T A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C A C G T A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGCCTGCGC
AACACCTGCT-
 A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGCCTGCGC---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGCCTGCGC
CGCACCTGCT-
 A C G T C T A G A G T C A C T G T A G C G T A C C G A T A C T G A G T C A C T G A T G C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T