Information for 11-RYCYTAGCACAWG (Motif 12)

C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C G T C T G A C T A G A C T G C T A G A G T C
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.8 +/- 28.4bp
Average Position of motif in Background65.7 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:RYCYTAGCACAWG-
----AAGCACATGG
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RYCYTAGCACAWG
--CCAGGAACAG-
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:RYCYTAGCACAWG--
-----ATCACGTGAC
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C

PB0043.1_Max_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RYCYTAGCACAWG----
-CCNNANCACGTGGTCN
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T A C G T A C G T A C G T
A C G T G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RYCYTAGCACAWG-----
--CGAAGCACACAAAATA
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RYCYTAGCACAWG----
-NNTTTGCACACGGCCC
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:RYCYTAGCACAWG
-----ACCACGTG
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RYCYTAGCACAWG-
NGNTCTAGAACCNGV
 A C G T C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RYCYTAGCACAWG--
-----GTCACGTGGT
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RYCYTAGCACAWG-----
-NNTNCGCACCTGTNGAN
 C T A G A G T C A G T C A G T C A G C T C G T A A C T G A G T C C G T A A G T C C G T A G C A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T