Information for 5-CACASTGCACTBTGCA (Motif 10)

A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
Reverse Opposite:
G C A T T A C G A G T C C G T A T A C G C G T A C T A G A G C T C T A G G T A C C T G A A T C G C A G T A T C G C G A T C T A G
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.666
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif242.5
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets50.3 +/- 26.4bp
Average Position of motif in Background51.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACASTGCACTBTGCA
AACACTGCACATTGTT
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACASTGCACTBTGCA-----
-----TGGACTTTGNNCTNTG
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACASTGCACTBTGCA----
-----TGGACTTTGNNCTCN
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACASTGCACTBTGCA
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACASTGCACTBTGCA-
-NNATTGGACTTTNGNN
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CACASTGCACTBTGCA--
--CAATGCATTGTGGGTA
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CACASTGCACTBTGCA
TTTGCACACGGCAC------
 A C G T A C G T A C G T A C G T A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CACASTGCACTBTGCA
-----CTCATTGTC--
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CACASTGCACTBTGCA
-AGGVNCCTTTGT---
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CACASTGCACTBTGCA
----CTGACCTTTG--
 A G T C G C T A T A G C G T C A A T G C A G C T C A T G G A T C C T G A A G T C C G A T A T G C C G A T C T A G A T G C C G T A
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T