Information for 7-GCWGAGYRGGRAGGRW (Motif 7)

A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
Reverse Opposite:
G C A T A G T C A G T C A G T C A C G T A G T C A G T C A G T C A G T C C T G A A G T C A C G T A G T C C G A T A C T G A G T C
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.6 +/- 19.6bp
Average Position of motif in Background50.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCWGAGYRGGRAGGRW
TGCGGAGTGGGACTGG-
 A C G T A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCWGAGYRGGRAGGRW
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCWGAGYRGGRAGGRW
-CACAGCAGGGGG---
 A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCWGAGYRGGRAGGRW
DCHCAGCAGGRGGCC-
 A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCWGAGYRGGRAGGRW--
------TGGGGAAGGGCM
 A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PB0167.1_Sox13_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCWGAGYRGGRAGGRW----
---GTATTGGGTGGGTAATT
 A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCWGAGYRGGRAGGRW
---GGGCGGGAAGG--
 A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCWGAGYRGGRAGGRW
NATNGGGNGGGGANAN-
 A C G T A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCWGAGYRGGRAGGRW
DCTCAGCAGG------
 A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCWGAGYRGGRAGGRW
GAGCACAGCAGGACA---
 A C G T A C G T A C T G A G T C C G T A A C T G C G T A C T A G A G C T C T A G A C T G A C T G C T A G C G T A A C T G A C T G C T A G C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T