Information for 10-TCCTATTGGC (Motif 28)

A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C
Reverse Opposite:
C T A G A T G C G T A C C G T A C G T A C A G T C G T A C T A G A C T G G T C A
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif76.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets33.2 +/- 23.0bp
Average Position of motif in Background50.7 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TCCTATTGGC-
-CCGATTGGCT
 A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TCCTATTGGC-
-----TTGGCA
 A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCCTATTGGC------
-CTGATTGGTCNATTT
 A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCCTATTGGC---
----NTTGGCANN
 A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCCTATTGGC----
--TGATTGGCTANN
 A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCCTATTGGC---
---NNTTGGCANN
 A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCCTATTGGC---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TCCTATTGGC
GATAACATCCTAGTAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCTATTGGC----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCTATTGGC
NTTTTATTGG-
 A C G T A C G T A G T C A G T C A C G T G C T A C G A T A C G T A C T G A T C G A G T C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T