Information for 15-AAAVCACAGCTCAGTA (Motif 22)

C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
Reverse Opposite:
C G A T G T C A A G T C A G C T A C T G G T C A C T A G A T G C A C G T A C T G A C G T C T A G A T C G C G A T A G C T C G A T
p-value:1e-9
log p-value:-2.080e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 33.2bp
Average Position of motif in Background85.9 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAAVCACAGCTCAGTA
AAACCACAGC------
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAVCACAGCTCAGTA
NAAACCACAG-------
 A C G T C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAVCACAGCTCAGTA
AAACCACANN------
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAVCACAGCTCAGTA
AAATCACAGCA-----
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAVCACAGCTCAGTA
AAACCACAGAN-----
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAVCACAGCTCAGTA
NWAACCACADNN-----
 A C G T C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAAVCACAGCTCAGTA-----
----CAAAGCTAATTAGNTTN
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAAVCACAGCTCAGTA-----
----CACCGCTAATTAGNNGN
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAAVCACAGCTCAGTA-
-------AGCTCATTAT
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAAVCACAGCTCAGTA
----CAAAGGTCAG--
 C G T A C T G A C G T A T A G C A G T C C G T A T G A C G T C A A T C G A G T C A C G T T G A C C T G A C T A G A C G T G C T A
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T