Information for 6-NCTGTGGTTA (Motif 5)

A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
Reverse Opposite:
G C A T G C T A C G T A G T A C G A T C C G T A G A T C C G T A C A T G T A C G
p-value:1e-23
log p-value:-5.363e+01
Information Content per bp:1.775
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.91%
Number of Background Sequences with motif573.4
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets55.5 +/- 25.7bp
Average Position of motif in Background50.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NCTGTGGTTA
GCTGTGGTTT
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NCTGTGGTTA-
-CTGTGGTTTN
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:NCTGTGGTTA
NNTGTGGTTT
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-NCTGTGGTTA
GTCTGTGGTTT
 A C G T A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-NCTGTGGTTA-
NNHTGTGGTTWN
 A C G T A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:NCTGTGGTTA
-TTGCGGTTT
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:NCTGTGGTTA
TTTGCGGTTT
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-NCTGTGGTTA
TGCTGTGATTT
 A C G T A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:NCTGTGGTTA
---GTGGAT-
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:NCTGTGGTTA---
--TGTGGATTNNN
 A T G C G T A C A C G T C T A G A C G T C T A G C A T G C G A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A