p-value: | 1e-14 |
log p-value: | -3.419e+01 |
Information Content per bp: | 1.830 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 3.68% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 61.6 +/- 17.4bp |
Average Position of motif in Background | 54.5 +/- 20.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCAGWCYWMRCY -BCAGACWA---- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCAGWCYWMRCY TNNGGGCAG-------- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGCAGWCYWMRCY AGGTGHCAGACA----- |
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EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCAGWCYWMRCY------- GGYAGCAYDTGCTDCCCNNN |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCAGWCYWMRCY -CCAGACRSVB-- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCAGWCYWMRCY -CCAGACAG---- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGCAGWCYWMRCY ATGCCAGACN----- |
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HIC2/MA0738.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCAGWCYWMRCY NGTGGGCAT-------- |
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POL002.1_INR/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGCAGWCYWMRCY -TCAGTCTT---- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCAGWCYWMRCY AGGTGNCAGACAG---- |
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