Information for 5-AAAGTACTCCTTG (Motif 9)

C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G
Reverse Opposite:
A T G C C G T A C T G A A C T G A C T G C G T A A C T G C G A T C G T A A G T C A C G T C G A T A C G T
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.944
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.5 +/- 23.0bp
Average Position of motif in Background50.2 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAAGTACTCCTTG-
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACTCCTTG-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGTACTCCTTG
-CNGTCCTCCC--
 C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTACTCCTTG
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACTCCTTG
CTTTAAGTACTTAATG
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACTCCTTG-
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGTACTCCTTG---
TACGAGACTCCTCTAAC
 A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTACTCCTTG
TTAAGTGCTT----
 A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTACTCCTTG--
NNNAATTAATCCCCNCN
 A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAAGTACTCCTTG--
GATAATTAATCCCTCTT
 A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A A G T C A C G T A G T C A G T C A G C T A C G T A T C G A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T