Information for 6-CCHTTYCTTGTTGYTA (Motif 4)

A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A
Reverse Opposite:
A C G T C T G A C T A G A G T C C G T A G T C A A G T C C G T A C T G A T C A G C T A G C G T A C T G A C A T G A C T G A C T G
p-value:1e-14
log p-value:-3.299e+01
Information Content per bp:1.759
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 24.8bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA---------
--NTNNNNNGTTGCTANGGNNCANA
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA---
-------CTGTTGCTAGGS
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA-----
------NCCGTTGCTANGNGN
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA---
----GTNTTGTTGTGANNT
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA-----
------NNCGTTGCTATGGNN
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA----
-----NNNTGTTGTTGTTNG
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCHTTYCTTGTTGYTA--
----TAATTGTTCTAAAC
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA---
----NTNTTGTTGTTTGTN
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCHTTYCTTGTTGYTA
------NATGTTGCAA
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CCHTTYCTTGTTGYTA-------
--------KGTTGCTAGGMAACA
 A G T C G T A C G A T C A G C T G C A T G A T C A G T C A G C T A C G T A C T G A C G T A C G T A C T G A G T C A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A