Information for 25-CCTCACCAGGGCT (Motif 39)

A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A G T C C G A T A C T G A C T G A C G T A C T G C G T A A C T G A C T G
p-value:1e-3
log p-value:-9.064e+00
Information Content per bp:1.951
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 29.2bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTCACCAGGGCT
CCTCACCTG----
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTCACCAGGGCT
-CACAGCAGGGGG
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCTCACCAGGGCT
-----CNAGGCCT
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTCACCAGGGCT
NNACTTACCTN----
 A C G T A C G T A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTCACCAGGGCT
NGTCCCNNGGGA-
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCACCAGGGCT--
DCHCAGCAGGRGGCC
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTCACCAGGGCT
DCTCAGCAGG---
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTCACCAGGGCT
-NNCACCTGNN--
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCTCACCAGGGCT
-----CTAGGCCT
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTCACCAGGGCT-
CCCCCCCGGGGGNN
 A G T C A G T C A C G T A G T C C G T A A G T C G T A C C G T A A C T G A C T G A C T G A G T C A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G