Information for 19-ACTGTTACCATCT (Motif 32)

T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T
Reverse Opposite:
C T G A C T A G T G C A C G A T A C T G T A C G A C G T C T G A C G T A G T A C C G T A C A T G A G C T
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.692
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif121.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets41.7 +/- 25.0bp
Average Position of motif in Background50.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACTGTTACCATCT
---ATTAACACCT
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACTGTTACCATCT--
TGATTGTTAACAGTTGG
 A C G T A C G T T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:ACTGTTACCATCT---
------ACCATCTGTT
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTGTTACCATCT-
----TTMACACCTT
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ACTGTTACCATCT---
------GCCATCTGTT
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTGTTACCATCT
SCTGTCARCACC-
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTGTTACCATCT--
YTAATTRAWWCCAGATGT
 A C G T A C G T A C G T T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTGTTACCATCT
GCTGTTACCCT--
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACTGTTACCATCT-----
------GCCAGCTGBTNB
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTGTTACCATCT
--ATTTTCCATT-
 T C G A G T A C G C A T A C T G C G A T G A C T T C G A A T G C A G T C C G T A A C G T A G T C A G C T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T