Information for 18-TGSCAGTGAGRTG (Motif 30)

A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A G T C A C G T A T G C C G T A A G T C G A C T A C T G A T G C A G T C C G T A
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.0 +/- 31.2bp
Average Position of motif in Background54.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGSCAGTGAGRTG
NNNNTGCCAGTGATTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGSCAGTGAGRTG
TGGCAGTTGN---
 A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGSCAGTGAGRTG
TGGCAGTTGG---
 A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGSCAGTGAGRTG
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGSCAGTGAGRTG
CTTGGCAA-------
 A C G T A C G T A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGSCAGTGAGRTG
SCTGTCAVTCAV---
 A C G T A C G T A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGSCAGTGAGRTG-----
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGSCAGTGAGRTG--
-----GTGGGGTGAT
 A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGSCAGTGAGRTG--
-----ATGGGGTGAT
 A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGSCAGTGAGRTG
VBTGWCAGCB-----
 A C G T A C G T A C G T A C T G A T C G A G T C C T G A A C T G A C G T A T C G C G T A A C T G C T A G A C G T A C T G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T