Information for 14-GCCWATCCWGGGGAGC (Motif 20)

A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
Reverse Opposite:
C T A G A G T C C A G T T A G C G A T C G A T C G A T C C G T A A C T G A T C G C G T A C A G T C G A T C T A G A C T G A G T C
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.696
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.7 +/- 19.3bp
Average Position of motif in Background44.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCCWATCCWGGGGAGC
ACTAGCCAATCA--------
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCWATCCWGGGGAGC
TGCCAA-----------
 A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCCWATCCWGGGGAGC
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCWATCCWGGGGAGC
AGCCAATCGG-------
 A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.51
Offset:12
Orientation:forward strand
Alignment:GCCWATCCWGGGGAGC-
------------CAGCC
 A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:GCCWATCCWGGGGAGC
----------CGGAGC
 A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCCWATCCWGGGGAGC
GGTGCCAAGT---------
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---GCCWATCCWGGGGAGC
SCTGTCAVTCAV-------
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------GCCWATCCWGGGGAGC
AAATGGACCAATCAG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GCCWATCCWGGGGAGC
-RCATTCCWGG-----
 A C T G G T A C A G T C C G T A G T C A C G A T A T G C G T A C G C A T C A T G C T A G C T A G A T C G G T C A C T A G A G T C
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T