Information for 12-GCCYAYRGCAAMAGCA (Motif 17)

A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C T G A G T C A G C T T C G A A C G T C T A G A C T G A T C G A T G C
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.876
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 26.1bp
Average Position of motif in Background57.3 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCYAYRGCAAMAGCA
--SCCTAGCAACAG--
 A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCYAYRGCAAMAGCA
TACCATAGCAACGGT-
 A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCYAYRGCAAMAGCA
CCGCATAGCAACGGA-
 A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCCYAYRGCAAMAGCA---
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCYAYRGCAAMAGCA
GTTGCCATGGCAAC----
 A C G T A C G T A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCYAYRGCAAMAGCA
ANTGCCTGAGGCAAN----
 A C G T A C G T A C G T A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCYAYRGCAAMAGCA
------TGGAACAGMA
 A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCYAYRGCAAMAGCA
CGCCTCAGGCA------
 A C G T A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCYAYRGCAAMAGCA
AGCCTCAGGCA------
 A C G T A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCYAYRGCAAMAGCA
----AGGGTAACAGC-
 A T C G A T G C G T A C A G T C C G T A A G C T C T G A A C T G A G T C C G T A C G T A T G A C C G T A C T A G A G T C C G T A
A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T