Information for 9-CAGAGTBAGTGCCTTC (Motif 10)

A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
Reverse Opposite:
C T A G G T C A C G T A A C T G A T C G A G T C G T C A A T G C A C G T T G A C C G T A T A G C C G A T T A G C G C A T T A C G
p-value:1e-11
log p-value:-2.755e+01
Information Content per bp:1.730
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.6 +/- 33.9bp
Average Position of motif in Background41.6 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGAGTBAGTGCCTTC
---RGTTAGTGCCCY-
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGAGTBAGTGCCTTC
----TTAAGTGCTT--
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGAGTBAGTGCCTTC
----TTRAGTGSYK--
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGAGTBAGTGCCTTC
---CTTGAGTGGCT--
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAGAGTBAGTGCCTTC
----TTGAGTGSTT--
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.53
Offset:11
Orientation:forward strand
Alignment:CAGAGTBAGTGCCTTC-
-----------GCTTCC
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGAGTBAGTGCCTTC
----BTGABTGACAGS
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGAGTBAGTGCCTTC
-AGAGGAAGTG-----
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAGAGTBAGTGCCTTC-
-----TGATTGGCTANN
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAGAGTBAGTGCCTTC---
----AGAAATGACTTCCCT
 A T G C C G T A A T C G C G T A A C T G C G A T A C G T C G T A A T C G A C G T A C T G A T G C G T A C A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T