Information for 11-TTGCAGRGAATNA (Motif 14)

C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
Reverse Opposite:
A G C T G A C T G T C A G A C T A C G T A G T C A G C T T A G C C G A T C A T G G A T C G T C A G C T A
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.620
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif171.3
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets47.3 +/- 26.7bp
Average Position of motif in Background52.3 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTGCAGRGAATNA
CATTTCCTGAGAAAT-
 A C G T A C G T A C G T C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGCAGRGAATNA
-NACAGGAAAT--
 C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGCAGRGAATNA
CTTCTGGGAAA--
 C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGCAGRGAATNA
TTCCKNAGAA---
 C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTGCAGRGAATNA
NNNCTTTCCAGGAAA---
 A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGCAGRGAATNA
TTTCCAGGAAATGG
 A C G T C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTGCAGRGAATNA
-NACAGGAAAT--
 C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAGRGAATNA
TTTCCNGGAAAN--
 A C G T C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGCAGRGAATNA
ATTTCCNGGAAATN-
 A C G T A C G T C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTGCAGRGAATNA
ANTTCTNNAGAA---
 A C G T A C G T C G A T C A G T C T A G G T A C C G T A A T C G T C G A C T A G T G C A C T G A A C G T C T G A C T G A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T A C G T