Information for 8-GGGAAAGCACCTR (Motif 10)

C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G
Reverse Opposite:
A G T C C G T A A T C G A C T G A G C T A C T G G A T C C G A T A C G T A C G T A G T C A G T C G T A C
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.831
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.0 +/- 22.2bp
Average Position of motif in Background68.3 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGAAAGCACCTR
GGGAAATCCCCN-
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCACCTR
-GGAAANCCCC--
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCACCTR
-GGAAATCCCC--
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGGAAAGCACCTR--
-----AACACCTGCT
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGGAAAGCACCTR--
-----TACACCTGTC
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGGAAAGCACCTR--
-----CGCACCTGCT
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGGAAAGCACCTR--
-----NNCACCTGNN
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCACCTR
-GGAAATTCCC--
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GGGAAAGCACCTR--
------NCACCTGTN
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGGAAAGCACCTR--
-----ACCACCTGTT
 C A T G A C T G C T A G C G T A G T C A C G T A C T A G A G T C C T G A A G T C A T G C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T