Information for 13-TSCATTGTCA (Motif 32)

A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G G T C A A G T C T C G A C G T A A C G T A C T G T A C G C G T A
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.704
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1048.8
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets46.0 +/- 26.4bp
Average Position of motif in Background48.1 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TSCATTGTCA
CTCATTGTC-
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TSCATTGTCA-
----NTGTCAN
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TSCATTGTCA----
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TSCATTGTCA--
--NNTTGGCANN
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TSCATTGTCA--
----YTGWCADY
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TSCATTGTCA-
-CCATTGTTTT
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TSCATTGTCA---
-----TGTCANYT
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TSCATTGTCA-
-NCCTTATCTG
 A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A A C G T
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TSCATTGTCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TSCATTGTCA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C G T C A C G A T A G C T T C A G A C G T A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A