Information for 22-GSGGTGTCTGTCA (Motif 29)

T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A
Reverse Opposite:
A C G T A C T G C T G A T A G C C G T A T A C G T C G A A G T C C G T A G A T C A G T C A T G C A T G C
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.702
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.1 +/- 19.0bp
Average Position of motif in Background47.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GSGGTGTCTGTCA---
----TGTCTGDCACCT
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GSGGTGTCTGTCA---
---CTGTCTGTCACCT
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GSGGTGTCTGTCA-
--SCTGTCAVTCAV
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GSGGTGTCTGTCA-
------GCTGTCAA
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GSGGTGTCTGTCA--
-----VGCTGWCAVB
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GSGGTGTCTGTCA-
------CCTGTCAA
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GSGGTGTCTGTCA-
--NCTGTCAATCAN
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GSGGTGTCTGTCA-
-------NTGTCAN
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GSGGTGTCTGTCA--
GGNGCGNCTGTTNNN
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GSGGTGTCTGTCA
-GSCTGTCACTCA
 T A C G T A C G T A C G C A T G A C G T A C T G A G C T A T G C C G A T A C T G G A C T G T A C T C G A
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A