Information for 13-AATAGGACAGAAT (Motif 18)

C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T
Reverse Opposite:
T G C A A C G T A C G T T G A C C G A T A C T G A C G T G A T C A G T C A C G T C G T A C G A T G C A T
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.725
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif83.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.5 +/- 29.8bp
Average Position of motif in Background50.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATAGGACAGAAT--
ARGAGGMCAAAATGW
 C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATAGGACAGAAT---
CGAAGCACACAAAATA
 C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AATAGGACAGAAT
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATAGGACAGAAT
TTATTAGTACATAN-
 A C G T A C G T C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATAGGACAGAAT
AAATAAGAAAAAAC
 A C G T C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATAGGACAGAAT----
--AAGAACATWHTGTTC
 C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATAGGACAGAAT---
AAAAAGTAAACAAAGAC
 A C G T C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AATAGGACAGAAT
-TRAGGTCA----
 C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATAGGACAGAAT-
AAGATAAGATAACA
 C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AATAGGACAGAAT-----
---CTCACACAATGGCGC
 C G T A C G T A G C A T C G T A C T A G C T A G C G T A T A G C C G T A A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C