Information for 13-YGCCCCCTGGTGGCCA (Motif 15)

A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
Reverse Opposite:
A G C T C T A G A T C G A G T C A G T C T C G A T G A C A G T C C G T A A C T G A T C G A C T G A T C G A C T G T A G C T C G A
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.723
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.7 +/- 14.4bp
Average Position of motif in Background58.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---YGCCCCCTGGTGGCCA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----YGCCCCCTGGTGGCCA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------YGCCCCCTGGTGGCCA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:YGCCCCCTGGTGGCCA
CCCCCCCGGGGGGGT-
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YGCCCCCTGGTGGCCA
CCCCCCCGGGGGGGT-
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YGCCCCCTGGTGGCCA
CACCCCCGGGGGGG--
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:YGCCCCCTGGTGGCCA
GACCCCCCGCTGTGC-
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YGCCCCCTGGTGGCCA
GGCCYCCTGCTGDGH-
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YGCCCCCTGGTGGCCA
GCACCCCTGGGTGCC-
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YGCCCCCTGGTGGCCA
--TCCCCTGGGGAC--
 A G C T A T C G A G T C A T G C T G A C A T G C A G T C C G A T C T A G A C T G A C G T C T A G C T A G A T G C A G T C C T G A
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T