Information for 10-TGAARATGACATSYTT (Motif 11)

A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
Reverse Opposite:
C T G A C G T A C T A G A T G C G T C A A C G T A C T G A C G T A T G C T C G A A C G T A G T C A G C T C A G T A G T C C G T A
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.737
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.9 +/- 25.6bp
Average Position of motif in Background56.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TGAARATGACATSYTT
-----TTGACAG----
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGAARATGACATSYTT
---ARNTGACA-----
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGAARATGACATSYTT
-----TTGACAGG---
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGAARATGACATSYTT
----CATGAC------
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGAARATGACATSYTT
-----TTGACAGC---
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGAARATGACATSYTT
----GATGACGT----
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGAARATGACATSYTT
----RHTGWCAR----
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGAARATGACATSYTT--
-----ATGACATCATCNN
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGAARATGACATSYTT--
-GATATTGACAGCTGCGT
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T A C G T A C G T
A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGAARATGACATSYTT--
--NNATTGACAGGTGCTT
 A C G T C T A G G T C A C T G A C T A G C G T A A G C T A T C G G T C A A G T C C G T A A C G T T A C G A G T C C G A T A G C T A C G T A C G T
A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T