Information for 13-AAGGCGTGAC (Motif 30)

C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.424e+01
Information Content per bp:1.957
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 28.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AAGGCGTGAC---
CAAAGGCGTGGCCAG
 A C G T A C G T C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AAGGCGTGAC-
---NCGTGACN
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAGGCGTGAC
-AGGTGTGA-
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGGCGTGAC
-AGGTGTGA-
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGGCGTGAC
-AGGTGTGA-
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAGGCGTGAC
AAGGTGTGAA
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGCGTGAC
ATGGGGTGAT
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGGCGTGAC---
AAGGTGTGAAAAT
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGGCGTGAC
-AGGTGTGA-
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGGCGTGAC
-AGGTGTGA-
 C G T A C G T A A C T G C T A G A G T C A C T G A C G T A C T G C G T A A G T C
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T