Information for 24-WGAASTTASYTTAACM (Motif 26)

C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A
Reverse Opposite:
A C G T C T A G A C G T A G C T G T C A G C T A C T G A A T G C A G C T G C T A C G T A A T C G A G C T A G C T A T G C C G T A
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.694
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 19.9bp
Average Position of motif in Background51.6 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM-
TGACCTTTANTTGACCT
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A A C G T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM-
TGACCTTTGCATGACCT
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-WGAASTTASYTTAACM-
BTGACCTCTNNHTGACCY
 A C G T C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-WGAASTTASYTTAACM
TAGAANVTTCTAGAA--
 A C G T C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM-
TGACCTCTCNNTGACCT
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A A C G T
G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM
----TTTCCTGGAAA-
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A
A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:WGAASTTASYTTAACM-----
----AACACCAAAACAAAGGA
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM
-GAACGTTCTAGAA--
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM
-NNNTTTCCTGGAAA-
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T

HSF4/MA0771.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:WGAASTTASYTTAACM
-GAANNTTCTAGAA--
 C G A T A T C G C T G A C T G A A T G C A C G T C G A T T C G A A T C G A G C T C G A T C A G T C T G A C G T A A G T C G T C A
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T A C G T