Information for 7-GCAGCATGACCRC (Motif 7)

A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
Reverse Opposite:
A T C G G A T C C A T G A C T G A C G T T A G C G T C A C A G T C T A G A G T C C G A T A T C G G T A C
p-value:1e-12
log p-value:-2.918e+01
Information Content per bp:1.675
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif370.9
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets45.1 +/- 26.7bp
Average Position of motif in Background50.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATGACCRC
GAGCACAGCAGGACA--
 A C G T A C G T A C G T A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATGACCRC
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATGACCRC
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATGACCRC
DCTCAGCAGG-----
 A C G T A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAGCATGACCRC
-CAGCC-------
 A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCATGACCRC
CGGAGC--------
 A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATGACCRC
NNGTCGCGTGNCAC-
 A C G T A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCATGACCRC
NGAAGC--------
 A C G T A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCAGCATGACCRC-
------TGACCYCT
 A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAGCATGACCRC
--TGCGTG-----
 A C T G T A G C C G T A A C T G A G T C G T C A A C G T A T C G T G C A T G A C G A T C C T A G T A G C
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T