p-value: | 1e-8 |
log p-value: | -2.038e+01 |
Information Content per bp: | 1.756 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.71% |
Number of Background Sequences with motif | 3.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.2 +/- 25.0bp |
Average Position of motif in Background | 80.6 +/- 16.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | CAVTCAHGTGCAGCCA- ---------BCAGACWA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.52 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | CAVTCAHGTGCAGCCA-------- ---------SCAGYCADGCATGAC |
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Dux/MA0611.1/Jaspar
Match Rank: | 3 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAVTCAHGTGCAGCCA CCAATCAA--------- |
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PB0028.1_Hbp1_1/Jaspar
Match Rank: | 4 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CAVTCAHGTGCAGCCA---- ----NNCATTCATTCATNNN |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 5 |
Score: | 0.49 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAVTCAHGTGCAGCCA--- --TACATGTGCACATAAAA |
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Id2/MA0617.1/Jaspar
Match Rank: | 6 |
Score: | 0.48 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CAVTCAHGTGCAGCCA ---TCACGTGC----- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 7 |
Score: | 0.48 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAVTCAHGTGCAGCCA GCACTTAA--------- |
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POL002.1_INR/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | CAVTCAHGTGCAGCCA- ---------TCAGTCTT |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 9 |
Score: | 0.48 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CAVTCAHGTGCAGCCA AGCCACTCAAG-------- |
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bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAVTCAHGTGCAGCCA -NGKCACGTGM----- |
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