Information for 22-RWGKAAATTGTGS (Motif 33)

C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T G T C A A G T C C G A T G A C T
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.877
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 35.6bp
Average Position of motif in Background30.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:RWGKAAATTGTGS----
---AAAATTGTTATGAA
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RWGKAAATTGTGS----
GGAAAAATTGTTAGGAA
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:RWGKAAATTGTGS-----
-AATCAATTGTTCCGCTA
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:RWGKAAATTGTGS
---CTCATTGTC-
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RWGKAAATTGTGS---------
GTGCTAATTGTGTGTGTACGCT
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RWGKAAATTGTGS----
-AANTTATTGTTCTNNA
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RWGKAAATTGTGS-----
-CNNNTATTGTTCNNNNN
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RWGKAAATTGTGS----
-NNTTTATTGTTCTNNN
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RWGKAAATTGTGS----
ANNTCTATTGTTCNNNA
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:forward strand
Alignment:RWGKAAATTGTGS
------ATTGTT-
 C T G A C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T