Information for 16-GCTAGGTCTATGA (Motif 26)

A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G C T C G T A A C T G C G T A A G T C A G T C A C G T C G T A A T C G A G T C
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 29.7bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTAGGTCTATGA----
---AGGTCANTGACCTN
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTAGGTCTATGA--
---AGGTCTCTAACC
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTAGGTCTATGA
-CNAGGCCT----
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTAGGTCTATGA
-CTAGGCCT----
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTAGGTCTATGA----
--TAATTCAATGAAGTG
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTAGGTCTATGA
GCTCGGSCTC---
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCTAGGTCTATGA-
--------CATGAC
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCTAGGTCTATGA--
---AGGTCAAGGTCA
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTAGGTCTATGA
TCAAGGTCAT---
 A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCTAGGTCTATGA
TATAAGTAGGTCAA---
 A C G T A C G T A C G T A C G T A C T G A T G C C G A T C G T A C T A G A C T G A C G T A G T C A C G T C T G A A C G T A C T G C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T