Information for 15-AAGGGCATTGTTC (Motif 23)

T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C
Reverse Opposite:
C A T G G C T A C T G A T G A C C G T A C G T A C A G T A C T G G A T C A G T C G A T C G A C T A C G T
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.653
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif300.8
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets56.1 +/- 23.3bp
Average Position of motif in Background50.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AAGGGCATTGTTC---
ANNTCCATTGTTCNNN
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.73
Offset:6
Orientation:forward strand
Alignment:AAGGGCATTGTTC
------ATTGTTA
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.73
Offset:6
Orientation:forward strand
Alignment:AAGGGCATTGTTC
------ATTGTT-
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AAGGGCATTGTTC-
----CCATTGTTYB
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AAGGGCATTGTTC-
----CCATTGTTNY
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C A C G T
A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AAGGGCATTGTTC
---NCCATTGTTY
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AAGGGCATTGTTC
AACAATGNTATTGTT-
 A C G T A C G T A C G T T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AAGGGCATTGTTC------
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AAGGGCATTGTTC
---NCCATTGTTC
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGGCATTGTTC----
ANNTCTATTGTTCNNNA
 T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C T G A G C T C G A T G T A C A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A