Information for 7-TRCCAAAAAGGGA (Motif 8)

C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A
Reverse Opposite:
G A C T A T G C G A T C A G T C A G C T A G C T A C G T G A C T A C G T C A T G C T A G G A T C G C T A
p-value:1e-15
log p-value:-3.624e+01
Information Content per bp:1.730
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif77.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets43.7 +/- 24.8bp
Average Position of motif in Background53.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TRCCAAAAAGGGA
--CCATATATGG-
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TRCCAAAAAGGGA-
TNCCATATATGGNA
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TRCCAAAAAGGGA
TNCCATATATGG-
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TRCCAAAAAGGGA
TGCCCTNAGGGCA
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TRCCAAAAAGGGA-
ATGCTAAAAATAGAA
 A C G T C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TRCCAAAAAGGGA------
----AGAAAGTGAAAGTGA
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TRCCAAAAAGGGA----
---AAAAAGAGGAAGTA
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TRCCAAAAAGGGA
-KCCAAAAATAGC
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TRCCAAAAAGGGA----
-----AAAGRGGAAGTG
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TRCCAAAAAGGGA
---AACAAAGG--
 C A G T C T A G A G T C G T A C G T C A C T G A C G T A C T G A C T G A C T A G C T A G A T C G C G T A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T