Information for 5-WAWTTTAGATWCCAGA (Motif 7)

C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T T C A G T A C G C G T A C G T A A G C T A G T C C G A T G T C A C G T A C T G A C G A T A G C T C G T A
p-value:1e-16
log p-value:-3.732e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.7 +/- 20.6bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:WAWTTTAGATWCCAGA--
--------ATGCCAGACN
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.53
Offset:6
Orientation:forward strand
Alignment:WAWTTTAGATWCCAGA-------
------CAAATCCAGACATCACA
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:WAWTTTAGATWCCAGA-----
-----------CCAGACRSVB
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--WAWTTTAGATWCCAGA--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.50
Offset:11
Orientation:reverse strand
Alignment:WAWTTTAGATWCCAGA---
-----------CCAGACAG
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-WAWTTTAGATWCCAGA
TTGAATGAAATTCGA--
 A C G T C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:WAWTTTAGATWCCAGA--
-ANANNTGATACCCTATN
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:WAWTTTAGATWCCAGA---
----BCNGGTTCTAGANCN
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:WAWTTTAGATWCCAGA--
-GACAGAGATATCAGTGT
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:WAWTTTAGATWCCAGA----
---CTAAGGTTCTAGATCAC
 C G A T C T G A G C T A A G C T A C G T C A G T C G T A C T A G C T G A C G A T C G A T A T G C A G T C C G T A C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C