Information for 4-GKGGSAAGATGCAAWT (Motif 6)

C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T A C G T C A T G A G T C G T C A A C G T A G T C A C G T A G C T A T C G G T A C A G T C G T C A G A T C
p-value:1e-16
log p-value:-3.732e+01
Information Content per bp:1.734
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.4 +/- 17.1bp
Average Position of motif in Background20.9 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:6
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT
------ATATGCAAAT
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:GKGGSAAGATGCAAWT---
------ATATGCAAATNNN
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GKGGSAAGATGCAAWT
------TTATGCAAAT
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT-
-----AATATGCAAATT
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT---
-----AATATGCAAATTAG
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT---
-------WATGCAAATGAG
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT----
----TTGTATGCAAATTAGA
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT---
-------TATGCWAATBAV
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT
-------TATGCAAAT
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GKGGSAAGATGCAAWT--
------AGATGCAATCCC
 C A T G C A G T C T A G C A T G T A G C C T G A C G T A C T A G C G T A A C G T A C T G G A T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C