Information for 5-GAAGTGAAAC (Motif 3)

C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C
Reverse Opposite:
A T C G C G A T A C G T A C G T G T A C T C G A G A T C A G C T A G C T A G T C
p-value:1e-23
log p-value:-5.518e+01
Information Content per bp:1.880
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif139.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets50.8 +/- 23.9bp
Average Position of motif in Background49.1 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--GAAGTGAAAC
CGGAAGTGAAAC
 A C G T A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GAAGTGAAAC-
GGAAGTGAAAST
 A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GAAGTGAAAC-
GRAASTGAAAST
 A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTGAAAC-
GAAAMTGAAACT
 A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GAAGTGAAAC--
GAGAACCGAAACTG
 A C G T A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GAAGTGAAAC-
GAAASYGAAASY
 A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GAAGTGAAAC-
GAAAGTGAAAGT
 A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GAAGTGAAAC---
GGAAANTGAAACTNA
 A C G T A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GAAGTGAAAC--
--ACTGAAACCA
 C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T A C G T
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GAAGTGAAAC-
GAAACTGAAACT
 A C G T C T A G C T G A C T G A C T A G A G C T A C T G C G T A G T C A C G T A T A G C A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T