Information for 4-CAAGGAGCCAAARGSC (Motif 6)

T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
Reverse Opposite:
C A T G A T C G A G T C A G C T A G C T A G C T A C G T C A T G A T C G A G T C G A C T A T G C G A T C G A C T A G C T A T C G
p-value:1e-11
log p-value:-2.669e+01
Information Content per bp:1.583
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 25.9bp
Average Position of motif in Background63.1 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAAGGAGCCAAARGSC
----CAGCC-------
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAAGGAGCCAAARGSC
---CGTGCCAAG----
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAAGGAGCCAAARGSC
--CGGAGC--------
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAAGGAGCCAAARGSC
-----TGCCAA-----
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAAGGAGCCAAARGSC--
----CCGCCCAAGGGCAG
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGCCAAARGSC
CCTTCGGCGCCAAAAGG-
 A C G T A C G T T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGCCAAARGSC
AGCTCGGCGCCAAAAGC-
 A C G T A C G T T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAAGGAGCCAAARGSC
---GGTGCCAAGT---
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAAGGAGCCAAARGSC
GRTGMTRGAGCC-------
 A C G T A C G T A C G T T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAAGGAGCCAAARGSC
---BCAGACWA-----
 T A G C T C G A C T G A C T A G T A C G C T G A A C T G A T G C G T A C T G C A T C G A T C G A T C G A C T A G A T G C G T A C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T