Information for 5-WGGKGGCAGTGTT (Motif 3)

C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
Reverse Opposite:
T C G A C T G A G A T C C G T A A T G C A C G T A C T G G T A C G T A C G T C A G T A C A G T C G C T A
p-value:1e-24
log p-value:-5.619e+01
Information Content per bp:1.743
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif92.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets48.4 +/- 22.0bp
Average Position of motif in Background49.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:WGGKGGCAGTGTT
---TGGCAGTTGN
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:WGGKGGCAGTGTT
GGTTGGCAT----
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WGGKGGCAGTGTT
TNNGGGCAG----
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WGGKGGCAGTGTT---
NNNTGGCAGTTGGTNN
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----WGGKGGCAGTGTT
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WGGKGGCAGTGTT--
NNNNTGCCAGTGATTG
 A C G T C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------WGGKGGCAGTGTT
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WGGKGGCAGTGTT
---TGGCAGTTGG
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WGGKGGCAGTGTT
NGTGGGCAT----
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WGGKGGCAGTGTT
AGGTGTCA-----
 C G A T A C T G C A T G C A G T A C T G A C T G A G T C C G T A A T C G A C G T C T A G A G C T A G C T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T