Information for 4-CCAGAGGGMGCTG (Motif 2)

A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G
Reverse Opposite:
A T G C G T C A C T A G G T A C C A T G A T G C G T A C A G T C G A C T G T A C C A G T C T A G A T C G
p-value:1e-33
log p-value:-7.827e+01
Information Content per bp:1.698
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.20%
Number of Background Sequences with motif286.5
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets54.4 +/- 26.3bp
Average Position of motif in Background51.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCAGAGGGMGCTG---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CCAGAGGGMGCTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAGAGGGMGCTG
SCCTSAGGSCAW--
 A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAGAGGGMGCTG-
ANTGCGGGGGCGGN
 A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGGGMGCTG
GCCTCAGGGCAT--
 A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CCAGAGGGMGCTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAGAGGGMGCTG
TGCCCNGGGGCA---
 A C G T A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGAGGGMGCTG-
--RGKGGGCGKGGC
 A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G A C G T
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAGAGGGMGCTG---
--GGCGGGGGCGGGGG
 A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGGGMGCTG
TGTCAGGGGGCG---
 A C G T A C G T A T G C A G T C G T C A A C T G C T G A A C T G C A T G T A C G G T A C C A T G A G T C C A G T A T C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T