Information for 12-CTGCAGGGCAATG (Motif 15)

A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G G T A C C G T A C T A G
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 27.3bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGGCAATG
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGCAGGGCAATG----
---NAGGTCANTGACCT
 A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGCAGGGCAATG
--TNNGGGCAG--
 A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGCAGGGCAATG-
----AAAACAATGG
 A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGCAGGGCAATG
WDNCTGGGCA---
 A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGGCAATG
TGCCCTNAGGGCA---
 A C G T A C G T A C G T A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGCAGGGCAATG----
---TAGGGCAAAGGTCA
 A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGGGCAATG
ATTTGCATAACAAAG
 A C G T A C G T A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTGCAGGGCAATG--
------GACAATGNN
 A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAGGGCAATG
GCCTCAGGGCAT--
 A C G T A G T C A C G T A C T G G T A C C G T A A C T G A C T G A C T G A G T C G T C A C G T A A C G T A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T