Information for 10-TGGGGCCATTTCA (Motif 11)

C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
Reverse Opposite:
A C G T T A C G G C T A G T C A T C G A A C G T C T A G T A C G A T G C G T A C G A T C A G T C C G T A
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.657
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif441.1
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets47.2 +/- 27.2bp
Average Position of motif in Background49.4 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGCCATTTCA
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGGGGCCATTTCA
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGGGGCCATTTCA
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGGGCCATTTCA
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGGCCATTTCA
AGRGGTCA-----
 C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGGCCATTTCA
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGGGGCCATTTCA
AGAGCGGGGTCAAGTA-
 A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGGGCCATTTCA
TRAGGTCA-----
 C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGCCATTTCA
NRRGGGTCTT----
 A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGGGGCCATTTCA
TGTCAGGGGGCG-----
 A C G T A C G T A C G T A C G T C G A T C T A G C T A G C A T G A T C G A T G C G A T C T G C A A G C T C A G T C A G T A T G C G T C A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T