Information for 5-TAAACCACAA (Motif 5)

A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A
Reverse Opposite:
G A C T C A G T C T A G C G A T C A T G A C T G A G C T C G A T C G A T T G C A
p-value:1e-20
log p-value:-4.618e+01
Information Content per bp:1.668
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif11.97%
Number of Background Sequences with motif2012.0
Percentage of Background Sequences with motif4.17%
Average Position of motif in Targets53.5 +/- 25.1bp
Average Position of motif in Background49.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:forward strand
Alignment:TAAACCACAA-
-AAACCACANN
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TAAACCACAA
NAAACCACAG
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:TAAACCACAA-
-AAACCACAGC
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TAAACCACAA--
NWAACCACADNN
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:TAAACCACAA--
-AAACCACAGAN
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TAAACCACAA-
-AAACCGCAAA
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.87
Offset:1
Orientation:forward strand
Alignment:TAAACCACAA
-AAACCGCAA
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TAAACCACAA
--ATCCAC--
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAAACCACAA-----
CAAACAACAACACCT
 A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAACCACAA
TCCAATCCACA-
 A C G T A C G T A C G T G C T A G C T A T C G A A G T C G T A C G C T A G A T C G T C A C T G A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T