Information for 12-CTTTTTTAAC (Motif 15)

A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C
Reverse Opposite:
A C T G G A C T A C G T G T C A T G C A G T C A C T G A G T C A C T G A A C T G
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.789
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif40.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.3 +/- 29.9bp
Average Position of motif in Background54.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTTAAC-----
NNNNCTGTTAACNNTNN
 A C G T A C G T A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTTAAC------
ACTTAGTTAACTAAAAA
 A C G T A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTTAAC------
CCTTAGTTAACTAAAAT
 A C G T A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTTAAC-
CCTTTTATAGNC
 A C G T A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTTTTTTAAC
CCWTTGTY--
 A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTAAC----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTTTAAC--
TTGACCTTTTGACCTT
 A C G T A C G T A C G T A C G T A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTTTTTTAAC----
----GTTAACTAGN
 A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTTTTTAAC
CTATTTTTGG
 A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

NFIL3/MA0025.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTTTTTAAC--
-TTATGTAACAT
 A G T C A G C T C A G T A G C T A C G T A C G T C A G T C G T A C T G A A G T C A C G T A C G T
A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T