Information for 4-CYCTGHCACAGCGSCW (Motif 6)

A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T
Reverse Opposite:
C G T A A T C G A T C G G T A C C T A G A G T C A C G T A C T G A C G T A T C G C G T A A T G C C G T A A T C G T C G A A C T G
p-value:1e-13
log p-value:-3.033e+01
Information Content per bp:1.753
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.7 +/- 19.6bp
Average Position of motif in Background38.3 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:CYCTGHCACAGCGSCW
------CACAGN----
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CYCTGHCACAGCGSCW--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CYCTGHCACAGCGSCW-
TCNNTTTACAGCGNNNT
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CYCTGHCACAGCGSCW-
TCNNTTTACAGCGNNNT
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CYCTGHCACAGCGSCW-
---TGGCACCATGCCAA
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CYCTGHCACAGCGSCW
-CCAGGAACAG-----
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CYCTGHCACAGCGSCW
---NGNGACAGCTGCN
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T
A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CYCTGHCACAGCGSCW-
TCNCTTTACAGCGNNNT
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CYCTGHCACAGCGSCW-
------AACAGCTGCAG
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CYCTGHCACAGCGSCW-
------GACAGCTGCAG
 A G T C A G C T A T G C G C A T A T C G G C A T A T G C C G T A A G T C C G T A A C T G A G T C A C T G A T G C A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G