Information for 3-CTGGCTSCAGGCAGGG (Motif 5)

A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G A T G C A T G C C G A T A C T G T A G C T C G A A C T G A G T C A T G C C G T A T A C G
p-value:1e-13
log p-value:-3.033e+01
Information Content per bp:1.769
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.8 +/- 23.2bp
Average Position of motif in Background41.1 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG-
--GGCCYCCTGCTGDGH
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG
--CGCCTCAGGCA---
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG
--AGCCTCAGGCA---
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGGCTSCAGGCAGGG
NTNGCCTCAGGCNNN-
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTGGCTSCAGGCAGGG
TTGGCANNNTGCCAAG
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG
--AGCCTCAGGCA---
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CTGGCTSCAGGCAGGG
-------CACGCA---
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG
------ACAGGAAGTG
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG---
-----GCCGCGCAGTGCGT
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTGGCTSCAGGCAGGG
------ACAGGAAGTG
 A G T C C G A T A T C G A C T G T A G C A C G T A T C G A G T C C G T A T A C G A T C G T A G C G T C A A C T G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G