Information for 5-CTAGAGGACA (Motif 4)

T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G G C A T A T G C A G T C C G A T A G T C A G C T G T C A A C T G
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.832
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif141.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets52.3 +/- 24.4bp
Average Position of motif in Background50.2 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CTAGAGGACA
--TRAGGTCA
 T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTAGAGGACA
--AGRGGTCA
 T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTAGAGGACA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTAGAGGACA----
TCTCAAAGGTCACGAG
 A C G T A C G T T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTAGAGGACA----
TCTCAAAGGTCACCTG
 A C G T A C G T T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTAGAGGACA-
---AAGGTCAC
 T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTAGAGGACA-
-CAAAGGTCAG
 T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTAGAGGACA----
-CAAAGGTCAAGGG
 T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTAGAGGACA
----AGGTCA
 T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTAGAGGACA
ANGNAAAGGTCA
 A C G T A C G T T G A C C A G T C T G A T C A G C G T A A C T G A T C G C G T A G T A C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A