Information for 4-GGTGCCATCT (Motif 3)

A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T
Reverse Opposite:
C T G A A C T G C T G A A C G T T A C G A T C G T A G C G C T A A G T C G T A C
p-value:1e-14
log p-value:-3.394e+01
Information Content per bp:1.836
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif227.0
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets42.8 +/- 19.8bp
Average Position of motif in Background52.4 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGTGCCATCT---
---GCCATCTGTT
 A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTGCCATCT
-ATGCCAACC
 A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGTGCCATCT--
GCNGCCATCTTG
 A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGCCATCT--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTGCCATCT------
CCNNACCATCTGGCCTN
 A C G T A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTGCCATCT--
GCCGCCATCTTG
 A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGTGCCATCT---
---ACCATCTGTT
 A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGTGCCATCT----
ACTATGCCAACCTACC
 A C G T A C G T A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTGCCATCT
AGGTGTCA---
 A C G T A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTGCCATCT--------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C T G A C T G C A G T A T C G A T G C A T G C C G T A A G C T A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A