Information for 12-GGMACCAATT (Motif 28)

A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T
Reverse Opposite:
C G T A C T G A A C G T A G C T C T A G A C T G C G A T A C G T G A T C A T G C
p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.763
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif137.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets42.7 +/- 22.9bp
Average Position of motif in Background51.7 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GGMACCAATT--
----CCAATTAA
 A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGMACCAATT
RGGGCACTAACY
 A C G T A C G T A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGMACCAATT--
---ACCGATTAG
 A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

Nobox/MA0125.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGMACCAATT-
---ACCAATTA
 A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T
A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

PH0107.1_Msx2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGMACCAATT------
GAAGACCAATTAGCGCT
 A C G T A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GGMACCAATT--
----CCAATTAG
 A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

PH0033.1_Gbx1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGMACCAATT------
TGCCACTAATTAGTGTA
 A C G T A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGMACCAATT-----
AACAACCAATTAATTC
 A C G T A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0127.1_Nobox/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGMACCAATT-------
CGCGCTAATTAGGTATC
 A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A T C G A T G C T C A G A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A C T G G C A T C G T A G A C T A T G C

GBX1/MA0889.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGMACCAATT---
---ACTAATTAGC
 A T C G C A T G G T C A C G T A A G T C A G T C T C G A C G T A A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C