Information for 9-YTACACTCAAAGY (Motif 14)

A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
Reverse Opposite:
C T G A A G T C A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T C T G A C T A G
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.4 +/- 6.4bp
Average Position of motif in Background49.1 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YTACACTCAAAGY
-NSCACTYVAV--
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YTACACTCAAAGY
MRSCACTYAA---
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:YTACACTCAAAGY
-RSCACTYRAG--
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YTACACTCAAAGY
AASCACTCAA---
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YTACACTCAAAGY
AGCCACTCAAG--
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YTACACTCAAAGY
--CCACTTGAA--
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YTACACTCAAAGY
--CCAATCAA---
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YTACACTCAAAGY
--GCACTTAA---
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YTACACTCAAAGY
-ACCACTTAA---
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YTACACTCAAAGY
TBGCACGCAA---
 A G T C A G C T C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A C G T A T C A G A G C T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T