Information for 8-TTTCAGAGCTTCT (Motif 4)

A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
Reverse Opposite:
G T C A A C T G C G T A C T G A A C T G A G T C A C G T A G T C C G A T A C T G C G T A C G T A C G T A
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 25.8bp
Average Position of motif in Background29.0 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTTCAGAGCTTCT
NAATTTTACGAGNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGAGCTTCT
TGGTTTCAGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGAGCTTCT-
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTCAGAGCTTCT
ANATTTTACGAGNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGAGCTTCT
NTTTTACGAGN----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGAGCTTCT
NTTTTCACACCTT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTTCAGAGCTTCT
-TTCACACCTT--
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TTTCAGAGCTTCT
TAGTATTTCCGATCTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TTTCAGAGCTTCT
-------GCTTCC
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTTCAGAGCTTCT
-TTMACACCTT--
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G G T A C A G C T A C G T A G T C A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T