Information for 6-ATGCCAATWRYYC (Motif 12)

C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G C T A G A G T C C G T A C G T A A C G T A C G T A C T G A C T G A G T C C G T A A C G T
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 10.4bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAATWRYYC
GGTGCCAAGT----
 A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGCCAATWRYYC
-TGCCAA------
 C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAATWRYYC
CGTGCCAAG-----
 A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCAATWRYYC
TTATGCAAAT-----
 A C G T A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAATWRYYC
TATGCWAATBAV--
 A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAATWRYYC
TATGCAAAT-----
 A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATGCCAATWRYYC
TTATGCAAATTA---
 A C G T A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGCCAATWRYYC
TATGCAAAT-----
 A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATGCCAATWRYYC
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATGCCAATWRYYC
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C G T A C G A T A C T G A G T C A G T C C G T A C G T A A C G T C G A T C T A G A G T C A G T C A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T