Information for 7-TWAAGGAAKCCATTGW (Motif 10)

C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T
Reverse Opposite:
C G T A A G T C C G T A G T C A A C G T A C T G T C A G G T A C A C G T A C G T A G T C G T A C A C G T A C G T G C T A C G T A
p-value:1e-14
log p-value:-3.281e+01
Information Content per bp:1.753
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.9 +/- 19.2bp
Average Position of motif in Background74.2 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.65
Offset:9
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW---
---------CCATTGTTYB
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.64
Offset:9
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW--
---------CCATTGTTC
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.63
Offset:9
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW-
---------CCTTTGTT
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:TWAAGGAAKCCATTGW--
--------NCCATTGTTY
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TWAAGGAAKCCATTGW-
--AGGGAAGTCATTTCT
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T
A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.62
Offset:9
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW-
---------CCWTTGTY
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:8
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW--
--------NCCATTGTTC
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW
----AGGVNCCTTTGT
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T
A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.61
Offset:8
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW-
--------CTCATTGTC
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.61
Offset:9
Orientation:forward strand
Alignment:TWAAGGAAKCCATTGW---
---------CCATTGTTTT
 C G A T C G A T G T C A G T C A A C T G A C T G T G C A C G T A C A T G A G T C A G T C C G T A A C G T A C G T A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T